File:Endogenous-Viral-Elements-in-Animal-Genomes-pgen.1001191.g005.jpg
From Wikimedia Commons, the free media repository
Jump to navigation
Jump to search
Size of this preview: 470 × 600 pixels. Other resolutions: 188 × 240 pixels | 376 × 480 pixels | 644 × 822 pixels.
Original file (644 × 822 pixels, file size: 262 KB, MIME type: image/jpeg)
File information
Structured data
Captions
Summary
[edit]DescriptionEndogenous-Viral-Elements-in-Animal-Genomes-pgen.1001191.g005.jpg |
English: (a) Summary genetic structures of ssDNA EVE sets shown relative to the genus type species. The most intact elements are shown for each host taxon. EVE hosts (bold) and abbreviations for viral type species (bold, underline), and the total number of matches identified (italic) are indicated to the left of each EVE structure. Bars behind ORFs indicate non-coding viral DNA. Intact ORFs (circles) and expressed sequences (crosses) are indicated. 1 The M. lucifugus element is a composite of two genomic contigs; 2 Structures represent a composite of semi-overlapping fragments; 3 Element has undergone genomic rearrangements, with the arrow indicating the direction of the rearranged fragment. (b) Phylogenetic relationships of dependovirus EVEs and representative exogenous viruses, based on NS1 gene and rooted on snake parvovirus. A dolphin EVE (indicated by an asterisk) groups robustly with avian rather than mammalian isolates. (d) Phylogenetic relationships of parvovirus EVEs and representative exogenous viruses, based on NS1 gene and rooted on Aleutian mink disease virus. Support for both ML phylogenetic trees was evaluated using 1,000 nonparametric bootstrap replicates. EVEs potentially comprising a new genus are indicated. (d) Phylogenetic relationships of circovirus EVEs and representative exogenous viruses, based on the Rep gene and rooted on avian circoviruses, with support for the ML phylogenetic tree evaluated using 1,000 nonparametric bootstrap replicates. Taxa that are shown as genetic structures in (a) are indicated by colored squares (EVEs) and circles (exogenous viruses) (a). Abbreviations: AAV = adeno-associated virus; MMV = minute virus of mice, AMDV = Aleutian mink disease virus, PV = parvovirus, CV = circovirus, PCV = porcine circovirus; HSAV = Human stool-associated circular virus. |
|
Date | ||
Source | Image file from Katzourakis A, Gifford R (2010). "Endogenous Viral Elements in Animal Genomes". PLOS Genetics. DOI:10.1371/journal.pgen.1001191. PMID 21124940. PMC: 2987831. | |
Author | Katzourakis A, Gifford R | |
Permission (Reusing this file) |
This file is licensed under the Creative Commons Attribution 3.0 Unported license.
|
|
Provenance InfoField |
|
File history
Click on a date/time to view the file as it appeared at that time.
Date/Time | Thumbnail | Dimensions | User | Comment | |
---|---|---|---|---|---|
current | 02:51, 9 January 2016 | 644 × 822 (262 KB) | Recitation-bot (talk | contribs) | Automatic upload of media from: doi:10.1371/journal.pgen.1001191 |
You cannot overwrite this file.
File usage on Commons
The following page uses this file:
Metadata
This file contains additional information such as Exif metadata which may have been added by the digital camera, scanner, or software program used to create or digitize it. If the file has been modified from its original state, some details such as the timestamp may not fully reflect those of the original file. The timestamp is only as accurate as the clock in the camera, and it may be completely wrong.
Short title | |
---|---|
IIM version | 2 |