File:Opsin Phylogeny with the main Groups the Tetraopsins Highlighted.svg
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Captions
Captions
Opsin Phylogeny with the main Groups the Tetraopsins Highlighted
Summary
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| Description |
English: Phylogenetic reconstruction of the opsins. The main opsin clades and the outgroup are collapsed. The outgroup contains non-opsin GPCRs. The frame highlights the tetraopsins. Next to each clade is shown the number of sequences within that clade. The first pie chart shows the percentage of a certain amino acid at lysine 2967.43. Red stands for lysine (K), purple stands for glutamic acid (E), the other amino acids are alternatively colored dark or mid-gray so that two adjacent amino acids have different shades of gray in the pie chart. Light gray stands for a gap at this position as not all sequences have data there. The second pie chart gives the taxon composition for each clade, green stands for craniates, dark blue for arthropods, light blue for mollusks, and purple for cnidarians.
The support values are given as pie charts. They are from right to left SH-aLRT/aBayes/UFBoot. Splits are considered supported when SH-aLRT ≥ 80%, aBayes ≥ 0.95, and UFBoot ≥ 95%. If a support value is above its threshold the pie chart is black otherwise gray. |
| Date | |
| Source | SVG version of figure 2a from the article: The Gluopsins: Opsins without the Retinal Binding Lysine, Cells 2022, 11(15), 2441; https://doi.org/10.3390/cells11152441 |
| Author | Martin Gühmann, Megan L. Porter, Michael J. Bok |
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| current | 11:50, 17 August 2022 | | 1,650 × 1,060 (97 KB) | Martin Gühmann (talk | contribs) | Uploaded a work by Martin Gühmann, Megan L. Porter, Michael J. Bok from SVG version of figure 2a from the article: The Gluopsins: Opsins without the Retinal Binding Lysine, Cells 2022, 11(15), 2441; https://doi.org/10.3390/cells11152441 with UploadWizard |
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